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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015922693.1_cds_XP_016471477.1_63813
CDS Infomation

[gene=LOC107793603] [db_xref=GeneID:107793603] [protein=tRNA pseudouridine(38/39) synthase-like] [protein_id=XP_016471477.1] [location=complement(join(241848..241903,242984..243058,243202..243306,244281..244404,245008..245125,245910..246040,246133..246193,246716..246809,247222..247309,247710..247820,248174..248219,249386..249458,249748..249832,249915..249974,250076..250132))] [gbkey=CDS]
Sequence

ATGGACCTCGTAGCATCCCTACAGTCGGAACTCGAGACTCTTCGAAGCAGGATTAAGGAA
TTGGAATCCGAAAATGTTAAATTATCTGCCCGGCTCTCGCATTGCAGTTGTCAAGAGACA
AAAGAGAAAAGTAACGGCAGCCTTGTGAAGAACGGAGTTTTGGATGGTCATGGAAAGAAG
AAAGATAAGCTCAGAGATTTAGGCTGTGGCGCAATGGTTATGCATCAGTTCCCAAAAAGA
TATGTCGCTTTGAAAGTCATGTATTTTGGTCCAAGGTTTTATGGTTTTGCTTCGGAGGCT
CAAATGGATCCCACTGTTGAGGGTGAACTTTTCAAAGCTCTAGAGAGGACAAGACTGATA
TCTGGAGACAAGAGGGAATTGCAGTACTCAAGATGTGGTAGAACGGACAAGGGAGTTTCC
TCTGTTGGTCAAGTGATTTCTCTCTTCTTAAGGTCAAAACATAGGGAGTCAAGAGGAGAC
AATAAGTATTCTGGGGAAATTTCTGTTGAAGAATCTTGTGGAGAAATGGACTATGTGAGG
GTACTAAATCAAGTTCTGCCAAATGACATTTGCATTATGGGCTGGTCTCCTATTCCAGTT
GGTTTCAGTGCAAGGTTCAGTTGTTTGAGCAGGGTGTACAAGTACTTCTTTTGGCATGGG
AATTTGAATATAACAGCAATGGAAACTGCTGCTGAGAAATTTTTAGGGGAACATGATTTC
AGAAATTTTTGCAAAATGGACGCGGGCAATGTGCACAACTACCGGAGGCACATAATATCA
TTTGAAATTCTCCCCTTTAGTGAAAGTTACAAAGCTGATCAACTCATGATTATGAAAATC
AAAGGTAGTGCTTTCCTTTGGCATCAAATCCGGTGCATGGTTGCTGTACTATTTCTGATT
GGCCAGGGTCTTGAGTCCCCTAATGTAATAGATGCACTTCTGGATATTGAAAGAACACCA
CGCAAACCTCAGTTTCTAATGGCTCCAGAGATACCTCTAGTTCTTCAATCGTGTGAATTT
GAAGGTCTCAAATTTATTTGTTCATCAGATGCAAAGCAGGCTTTGAATGAACATTTGGAG
CGGGAATGCCGAAGTTATAAACTTCAAGCCGCAATTTTTCATGAAGCTATCATAAGCACT
TCTGTTGAAATTGATGACAATATATCAAGTGAGCGTACTAAGAAGAAAGAAGCTTCCTAC
ACTCCTCTACTGTCTCGACCAACTGAGCCATCATATGAAGAGCGGCGTAAAAAGCTGGAT
GCAGGAGTTAGAAAGCCTAGATAG

Peptide Sequence

PEP ID

XP_016471477.1
PEP Infomation

PREDICTED: tRNA pseudouridine(38/39) synthase-like [Nicotiana tabacum]
Sequence

MDLVASLQSELETLRSRIKELESENVKLSARLSHCSCQETKEKSNGSLVKNGVLDGHGKK
KDKLRDLGCGAMVMHQFPKRYVALKVMYFGPRFYGFASEAQMDPTVEGELFKALERTRLI
SGDKRELQYSRCGRTDKGVSSVGQVISLFLRSKHRESRGDNKYSGEISVEESCGEMDYVR
VLNQVLPNDICIMGWSPIPVGFSARFSCLSRVYKYFFWHGNLNITAMETAAEKFLGEHDF
RNFCKMDAGNVHNYRRHIISFEILPFSESYKADQLMIMKIKGSAFLWHQIRCMVAVLFLI
GQGLESPNVIDALLDIERTPRKPQFLMAPEIPLVLQSCEFEGLKFICSSDAKQALNEHLE
RECRSYKLQAAIFHEAIISTSVEIDDNISSERTKKKEASYTPLLSRPTEPSYEERRKKLD
AGVRKPR

Transcript Sequence

Gene sequence data has not been registered.